{
  "species": "Acer palmatum",
  "source_vcf_samples": 134,
  "gwas_vcf_samples": 70,
  "gwas_is_subset_of_source_vcf": true,
  "displayed_genotype_names_match_gwas_vcf": true,
  "source_header_sha256": "36f9881d7738b13a4417c4e89ceb8743bb0e21306830f2fc748c04cd4f83593e",
  "gwas_header_sha256": "b4e212597c0c6ac2228fbe9af8843d4ace0c8a31c1a1a58df833fe48396cd5fe",
  "source_files": [
    "Acer_palmatum.snp-dp11-miss0.1-maf0.05.vcf.gz",
    "Acer_palmatum.snp.70.vcf.gz",
    "SNP.readme.txt"
  ],
  "check_scope": "VCF sample headers, displayed genotype names and both published 70-cultivar lists; exact phenotype values/year used for every displayed association remain to be reconciled.",
  "selection_criteria": "The 70-sample panel matches all 70 phenotyped cultivars in Table S19 (2022 and 2023) of Ma et al. (2026).",
  "catalog_identity_status": "The 134-record public catalog is not a fully reconciled sample manifest for the 134-sample VCF.",
  "vcf_names_not_exactly_in_catalog": [
    "BLV",
    "YIBASI",
    "ZJJ"
  ],
  "catalog_names_not_exactly_in_vcf": [
    "SBJ",
    "ZJJ__1",
    "ZJJ__2"
  ],
  "alias_mapping": "Unresolved names have not been paired or renamed by inference.",
  "published_phenotype_panel_match": 70,
  "phenotype_source": "https://doi.org/10.1186/s13059-026-04058-2",
  "published_phenotype_table": "Table S19",
  "phenotype_years": [
    2022,
    2023
  ],
  "published_trait_units": {
    "palmitic": "percent",
    "stearic": "percent",
    "oleic": "percent",
    "linoleic": "percent",
    "alpha_linolenic": "percent",
    "eicosenoic": "percent",
    "erucic": "percent",
    "nervonic": "percent"
  },
  "traits_absent_from_table_s19": [
    "margaric",
    "gamma_linolenic"
  ],
  "published_resequencing_table_note": "Table S18 has 134 rows, including two ZJJ rows; BLV and YIBASI are absent. These names are not equated to SBJ or suffixed ZJJ records."
}