{
  "project": "PRJNA877423",
  "samples": [
    {
      "local_sample": "A-7-7",
      "stage_daf": 85,
      "group": "CK",
      "biosample": "SAMN30702089",
      "rna_run": "SRR21460612",
      "ribo_run": "SRR21517732",
      "rna_raw_reads": 44785756,
      "rna_ena_spots": 22392878,
      "ribo_raw_spots": 71742716,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    },
    {
      "local_sample": "C-7-7",
      "stage_daf": 85,
      "group": "CK",
      "biosample": "SAMN30702090",
      "rna_run": "SRR21460611",
      "ribo_run": "SRR21517731",
      "rna_raw_reads": 38177980,
      "rna_ena_spots": 19088990,
      "ribo_raw_spots": 57882778,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    },
    {
      "local_sample": "D-7-7",
      "stage_daf": 85,
      "group": "CK",
      "biosample": "SAMN30702091",
      "rna_run": "SRR21460610",
      "ribo_run": "SRR21517730",
      "rna_raw_reads": 38689928,
      "rna_ena_spots": 19344964,
      "ribo_raw_spots": 69530538,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    },
    {
      "local_sample": "A-8-19",
      "stage_daf": 115,
      "group": "T",
      "biosample": "SAMN30702092",
      "rna_run": "SRR21460609",
      "ribo_run": "SRR21517729",
      "rna_raw_reads": 41196132,
      "rna_ena_spots": 20598066,
      "ribo_raw_spots": 65315155,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    },
    {
      "local_sample": "C-8-19",
      "stage_daf": 115,
      "group": "T",
      "biosample": "SAMN30702093",
      "rna_run": "SRR21460608",
      "ribo_run": "SRR21517728",
      "rna_raw_reads": 47437538,
      "rna_ena_spots": 23718769,
      "ribo_raw_spots": 56931382,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    },
    {
      "local_sample": "D-8-19",
      "stage_daf": 115,
      "group": "T",
      "biosample": "SAMN30702094",
      "rna_run": "SRR21460607",
      "ribo_run": "SRR21517727",
      "rna_raw_reads": 41309596,
      "rna_ena_spots": 20654798,
      "ribo_raw_spots": 52393180,
      "evidence": "Unique exact raw-count match in both assays; shared BioSample; ENA developmental stage",
      "source": "https://doi.org/10.1186/s12915-023-01564-8"
    }
  ],
  "statistical_status": "Historical gene-level differential and TE results withheld; replacement analysis is not validated.",
  "individual_pairing": "The study reports three individuals per stage; ENA establishes RNA/Ribo pairing within each BioSample, not the cross-stage identity of each tree."
}